When an user disables the Client Auto-protection this dis-ables Auto-protection, Download Insight, Sonar and Email Protection. Auto-Protect will automatically enable by default after 5 minutes, Download Insight and Sonar needs to be re-enabled manually and the client will show that it is not protected when any portion of the client is dis-abled.
All of these items should either be re-enabled with auto-protect or they should have their own timers to be re-enabled.